PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P25240_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family Nin-like
Protein Properties Length: 1228aa    MW: 135084 Da    PI: 6.691
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P25240_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK77.61.4e-24870938152
                 RWP-RK   1 aekeisledlskyFslpikdAAkeLg.................vclTvLKriCRqyGIkRWPhRkiksl 52 
                            aek isle+l++yFs+++kdAAk+Lg                  c+T++KriCR++GI+RWP+Rki+++
  GSMUA_Achr3P25240_001 870 AEKMISLEVLQQYFSGSLKDAAKSLGgnthgsvvatvvhswvaFCPTTMKRICRHHGISRWPSRKINKV 938
                            5899**************************************99***********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF011906.9E-1535123No hitNo description
PROSITE profilePS5151914.254860958IPR003035RWP-RK domain
PfamPF020424.6E-23874938IPR003035RWP-RK domain
SuperFamilySSF542773.27E-2210731164No hitNo description
Gene3DG3DSA:3.10.20.2402.4E-2410781159No hitNo description
SMARTSM006662.1E-2510781160IPR000270PB1 domain
PROSITE profilePS5174521.63610781160IPR000270PB1 domain
PfamPF005645.6E-1610791159IPR000270PB1 domain
CDDcd064072.52E-3610791159No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0010118Biological Processstomatal movement
GO:0010167Biological Processresponse to nitrate
GO:0042128Biological Processnitrate assimilation
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1228 aa     Download sequence    Send to blast
MAARAHCSLA LSLLCIFLCS SASGGAREQL PSALVVGTVF CDTCFRQELA ESSYFISGAS  60
VAVECGDAAN QLGYRKVATT DRRGVFGVRL PPRISRNLGL VEACSVKLLR SNEPFCAVAA  120
SATTAGLRLQ SRRNGVRVYS AGFFSFKLLN QPELCHQKPQ LDQAAFFLPS PPSFGGVPVP  180
ANPLFGLRVW AACDPHHKSM SSMDGVEASG SHEGTCTMAP PCWHRSMPPP RAVVILSDGC  240
TRRAVPVPPV LPYLIRGVTP RWVRRPPVLL SQPHRGAPLL RWDHRPRSTD PLLPMSDSGG  300
RHSPLPPVSA ALLDIELDVD GSPWPFDLSS FVASPFSPFF LSSSSCPPPP SSLSFQLPPS  360
PLWILEDRAP EIPGALAECS RFLDGEIPPH LDLTCSPDTT IAKAYVLDSK ARQVQIPVPE  420
ENCGSSCVIK ERMTQALRYF KESTDQQALV QVWAPVKNGS RCVLTTSGQP FILDPQSTKL  480
LQYRTVSLMY IFSVDEDDDA DMGLPGRVFT KRMPEWTPNV QYYSSKEYQR LNHALLHNVQ  540
GTLALPVFEP SGHSCIGVVE IVMTSQKVNY AYEVDKVCKA LEAVNLKSSE ILDHPNVVVS  600
FYHSVTIAND GRQAALAEIL EILTVVCEAE KLPLAQTWVP CRHRTVLAHG GGLKKICSSF  660
DGSCAGQVCM STTDVAFYII DAHLWGFREA CVEHHLQKGQ GVAGRAFALR RACFSRDITE  720
YCKSDYPLVH YARMFDLAGC LAICLQSIHS GDDDYILEFF LPAECKSSAE QQSLLNSISA  780
LLIQCFQSLK VITGVEFQEG ISLQLVDLVT DDNYESIPKH LSSPCDDTHK SPETNIYEAE  840
DNDDSRNEGN ATSDLDKQQV ATDSNRRGKA EKMISLEVLQ QYFSGSLKDA AKSLGGNTHG  900
SVVATVVHSW VAFCPTTMKR ICRHHGISRW PSRKINKVNR SLSKLKHVIE SVQGAGALDL  960
ASLACPLPSR GSEDQRNKSV SLQVHVEERV HLQVEAGRDS HCSTGSSSEG SMDDTPTSQG  1020
SCQGNPPQLP VGLLIKDSAS SKDLQNLCTF AAEASQDERG MAVTQNTLHP WEMQENRTVI  1080
IKASYKEDII RFRLPHSAGV LAVKDEISKR LKLEVGTFDI KYLDDDHEWV MLTCDSDLEE  1140
CIEISRLSGA HIIRLSVHDI MTHHGSSCGS SEFDHHSYVP RQFSMDAANL LFWPTFCFVV  1200
KLFVSCRHNC RFFDMATVSV YNVRKLSL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00449DAPTransfer from AT4G24020Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009393072.10.0PREDICTED: protein NLP3-like
SwissprotQ5NB820.0NLP3_ORYSJ; Protein NLP3
TrEMBLM0SHP00.0M0SHP0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P25240_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47783660
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.10.0NIN like protein 7